FastQCFastQC Report
Fri 14 Jul 2023
SRR8752389_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8752389_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35828957
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length85
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGGAGTGGAATTCTCG496410.13854994439274354No Hit
CCGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGGGATGGAATTCTCG419040.11695567917313363No Hit
CCGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAGGGTGGAATTCTCG376400.10505469081893731No Hit
CCGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGGGGTGGAATTCTCG361650.10093790896564474No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)