FastQCFastQC Report
Fri 14 Jul 2023
SRR8756007_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756007_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16503495
Total Bases491.8 Mbp
Sequences flagged as poor quality0
Sequence length18-35
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTCCACGTTCTAGCATTCAAGGTCCCA14356458.699036173852871No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCT4807652.9131102230163974No Hit
TGATGTATTTATTAGATAAAAAATCAATG3063521.8562855928395774No Hit
ATGTATTTATTAGATAAAAAATCAATG2591791.57044916849431No Hit
ATTCCAGGGGGCATGCCTGTTTGAGCGTCATTT2273101.3773446170038528No Hit
AGAGATGTATTTATTAGATAAAAAATCAATG2197231.331372536544532No Hit
ACTATGCCGACTAGGGATCGGGTGGTGTT1852541.1225137463307013No Hit
CAAGAGGTGCACAATCGACCGATCCTGA1661281.006623142552532No Hit
TTTTTCCACGTTCTAGCATTCAAGGTCCCA1632630.9892631833438917No Hit
AACTATGCCGACTAGGGATCGGGTGGTGTT1604110.9719819953288682No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCT1547610.9377468227184607No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCTTGAG1539030.9325479239397474No Hit
ACTATGCCGACTAGGGATCGGGTGGTGT1515750.9184418209597422No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCTTGAGT1506050.9125642780514066No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA1397030.8465055432197846No Hit
TTCCAACGGGGCCTTTCCTTCTGGCTAACCT1304620.7905113432033638No Hit
AGAGATGTATTTATTAGATAAAAAATCA1069180.6478506522406314No Hit
TCAATATAGATGGATACGAATAAGGCGTCC1046550.6341384052287107No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCTT1037970.6289395064499974No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCTTG1034050.6265642519963196No Hit
AACTATGCCGACTAGGGATCGGGTGGTGT994540.6026238684593778No Hit
TTGATGTATTTATTAGATAAAAAATCAATG987230.5981945036490756No Hit
ATGTATTTATTAGATAAAAAATCAATGT956220.5794045443101598No Hit
AAATATAGATGGATACGAATAAGGCGTCC930250.563668483554544No Hit
TTGCCAAGGACGTTTTCATTAATCAAGAACGA923070.5593178899378586No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCTTGAG876210.5309239043002709No Hit
AAGAGGTGCACAATCGACCGATCCTGA809800.4906839430072236No Hit
AAATACTGAATATCTAAATATTATTATTACTT788130.47755339096355043No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA787820.47736555196338715No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCAT763500.4626292794344471No Hit
TCCAGGGGGCATGCCTGTTTGAGCGTCATTT746290.45220118526409103No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGC640200.38791783195014146No Hit
GATGTATTTATTAGATAAAAAATCAATG589890.35743338002041386No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGCA574900.34835045546413046No Hit
ACAATATAGATGGATACGAATAAGGCGTCC548290.33222659806301635No Hit
AAACTATGCCGACTAGGGATCGGGTGGTGTT545980.3308268945456705No Hit
AGAGATGTATTTATTAGATAAAAAATCAAT538570.326336936509509No Hit
TTTCCAGGGGGCATGCCTGTTTGAGCGTCATTT510170.3091284603655165No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCTTGA505170.3060987990725601No Hit
TGCCAAGGACGTTTTCATTAATCAAGAACGA484280.2934408741905881No Hit
TTTGTGGCGTCGCTGAACCATAGCAGGCTAGCA476670.2888297297027084No Hit
TTGCCAAGGACGTTTTCATTAATCAAGAACG465470.282043288406486No Hit
ACGTTCTAGCATTCAAGGTCCCA419290.25406133670474046No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCTT413500.25055298892749683No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACC406390.24624481056891284No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCTTG394600.23910086924012158No Hit
TTCCAGGGGGCATGCCTGTTTGAGCGTCATTT390020.23632569949577348No Hit
TGATGTATTTATTAGATAAAAAATCAATGT366910.22232260499972883No Hit
TCCAGGGGGCATGCCTGTTTGAGCGTCATT365320.22135917270856867No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC356510.21602090951037947No Hit
AACGGGGCCTTTCCTTCTGGCTAACCTTGAGT347340.21046451069909738No Hit
ATAGATGGATACGAATAAGGCGTCC343940.208404341019887No Hit
GCCAAGGACGTTTTCATTAATCAAGAACGA326330.19773387394609446No Hit
AGATGGATACGAATAAGGCGTCC321850.1950192974276055No Hit
TTCGGTGCCCGAGTTGTAATTTGGAGAGGGCA321400.19474662791123942No Hit
TTCGGTGCCCGAGTTGTAATTTGGAGAGGGC304420.18445789816035937No Hit
AAAACTATGCCGACTAGGGATCGGGTGGTGTT303220.1837307794500498No Hit
TTTCGGTGCCCGAGTTGTAATTTGGAGAGGGC301210.18251285561028133No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAAT294280.1783137450582437No Hit
TCCGATATAGTGTAACGGCTATCACATCACG292450.17720488902502166No Hit
TTGCCAAGGACGTTTTCATTAATCAAGAACGAA291370.1765504821857431No Hit
TATGTATTTATTAGATAAAAAATCAATG290440.1759869651852532No Hit
TTCCAACGGGGCCTTTCCTTCTGGCTAACCTT282820.17136976137478757No Hit
AACTATGCCGACTAGGGATCGGGTGGTGTTT280390.16989734598641076No Hit
TTGTGGCGTCGCTGAACCATAGCAGGCTAGCA280250.16981251547020798No Hit
TCAACGGGGCCTTTCCTTCTGGCTAACCTTGAGT266580.16152942149526509No Hit
ACAATATAGATGGATACGAATAAGGCGTC252980.15328874277842358No Hit
TATAGATGGATACGAATAAGGCGTCC248870.1507983611956134No Hit
ACACAATATAGATGGATACGAATAAGGCGTCC245480.14874425083898896No Hit
AATATAGATGGATACGAATAAGGCGTCC245310.14864124235502843No Hit
TCAATATAGATGGATACGAATAAGGCGTC244470.14813225925781176No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAG238750.1446663267386696No Hit
TTCCAACGGGGCCTTTCCTTCTGGCTAACCTTG238000.14421187754472614No Hit
ATTTATTAGATAAAAAATCAATG227030.13756480066797971No Hit
TAGAGATGTATTTATTAGATAAAAAATCAATG225800.13681950398991244No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCTTGA224220.1358621310213382No Hit
AAACTATGCCGACTAGGGATCGGGTGGTGTTT223510.1354319191177384No Hit
CAACGGGGCCTTTCCTTCTGGCTAACCTTGAGT218670.13249920698615655No Hit
TTTTTCCACGTTCTAGCATTCAAGGTCCC212650.12885149478943703No Hit
TTTGCTCCACACAATATAGATGGATACGAAT210310.12743361330433342No Hit
TTTGTGGCGTCGCTGAACCATAGCAGGCTAGC209570.12698522343297586No Hit
AGATGTATTTATTAGATAAAAAATCAATG208940.12660348611006336No Hit
TGATGTATTTATTAGATAAAAAATCAAT204890.12414946046276863No Hit
ATATAGATGGATACGAATAAGGCGTCC186740.11315178996933681No Hit
AAACTATGCCGACTAGGGATCGGGTGGTGT185560.11243678990419909No Hit
TTTCCAACGGGGCCTTTCCTTCTGGCTAACCT182260.11043721345084784No Hit
TTGGCGTCGCTGAACCATAGCAGGCTAGCA178450.10812861154561504No Hit
TTCCACGTTCTAGCATTCAAGGTCCCA177180.10735907757720409No Hit
TTTGACCTCAAATCAGGTAGGAGTACCCGCTGAA175220.10617145035036518No Hit
AAATATAGATGGATACGAATAAGGCGTC172780.10469297563940246No Hit
TAAACTATGCCGACTAGGGATCGGGTGGTGTT170700.10343263654153258No Hit
ATAATAACTTTTCGAATCGCAT168950.1023722550889978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)