FastQCFastQC Report
Fri 14 Jul 2023
SRR8756008_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756008_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105555397
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTATTTATTAGATAAAAAATCAATG82507377.816499425415453No Hit
ATGTATTTATTAGATAAAAAATCAAT15096961.4302404641612025No Hit
TGATGTATTTATTAGATAAAAAATCAATG11623641.101188601469615No Hit
TATGTATTTATTAGATAAAAAATCAATG9760040.9246367573227924No Hit
ATGTTAGGGATAACAGGGTAATGCGA7160130.6783291241849055No Hit
ATGTATTTATTAGATAAAAAATCAATGT5832800.5525818826677332No Hit
TTGATGTATTTATTAGATAAAAAATCAATG4598670.43566412809759025No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA4246180.40227028846284385No Hit
AGAGATGTATTTATTAGATAAAAAATCAATG4170270.39507880397626666No Hit
AATGTATTTATTAGATAAAAAATCAATG3502760.3318409195126233No Hit
TGATGTATTTATTAGATAAAAAATCAAT2880100.27285198879977685No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCAT2862940.2712263021472981No Hit
AGAGATGTATTTATTAGATAAAAAATCA2776490.26303628984503746No Hit
TCCGATATAGTGTAACGGCTATCACATCACG2730100.258641441138249No Hit
AAATACTGAATATCTAAATATTATTATTACTT2177590.20629830988177703No Hit
TTTGGAAGAGATGTATTTATTAGATA2116960.2005544065169875No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC2075900.19666450593710522No Hit
GATGTATTTATTAGATAAAAAATCAATG2026920.19202428844069433No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGCA1920310.1819243785327244No Hit
TATGTATTTATTAGATAAAAAATCAAT1875970.17772374064397672No Hit
TGATGTATTTATTAGATAAAAAATCA1656300.15691286727859116No Hit
GTTTAGTGGTAAAATCCAACGT1531890.1451266390481199No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA1496520.14177579190953163No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC1354350.1283070348359355No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC1266020.11993891700298376No Hit
ATGTATTTATTAGATAAAAAATCA1263170.11966891659741472No Hit
AAGAGGTGCACAATCGACCGATCCTGA1177610.11156322021127921No Hit
CTTTGATGATTCATAATAACTTTTCGAATCGCAT1170180.11085932441711151No Hit
TTGATGTATTTATTAGATAAAAAATCAAT1133790.10741184555442486No Hit
TTGGGTAAAACCATACTGCAGACATCT1108080.10497615768523896No Hit
TTCGGTGCCCGAGTTGTAATTTGGAGAGGGCA1083290.10262762784171045No Hit
ATGTATTTATTAGATAAAAAATCAA1082980.10259825937654331No Hit
TGATGTATTTATTAGATAAAAAATCAATGT1055590.10000341337354832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)