FastQCFastQC Report
Fri 14 Jul 2023
SRR8756009_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756009_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108348599
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTATTTATTAGATAAAAAATCAATG1415037713.060046120208716No Hit
ATGTATTTATTAGATAAAAAATCAAT23955112.2109293725154675No Hit
ATGTTAGGGATAACAGGGTAATGCGA11804391.0894824768338722No Hit
TGATGTATTTATTAGATAAAAAATCAATG9949260.918263834680502No Hit
ATGTATTTATTAGATAAAAAATCAATGT9665540.8920779861675922No Hit
TATGTATTTATTAGATAAAAAATCAATG7595590.7010325994155218No Hit
AGAGATGTATTTATTAGATAAAAAATCAATG4367370.40308504588970273No Hit
GATGTATTTATTAGATAAAAAATCAATG4179710.38576502498200277No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA3894950.3594831899949163No Hit
AGAGATGTATTTATTAGATAAAAAATCA3204780.2957841660693739No Hit
TCCGATATAGTGTAACGGCTATCACATCACG3182740.2937499911743206No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCAT3044770.28101609324916144No Hit
AATGTATTTATTAGATAAAAAATCAATG2997510.27665424635532204No Hit
TTGATGTATTTATTAGATAAAAAATCAATG2774940.25611221793463157No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGCA2560990.23636576971336748No Hit
TGATGTATTTATTAGATAAAAAATCAAT2517000.23230572644506461No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA2291000.21144712724896425No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC2288300.21119793159485156No Hit
AAGAGGTGCACAATCGACCGATCCTGA2049320.18914134736527605No Hit
GTTTAGTGGTAAAATCCAACGT2040920.1883660719969254No Hit
AAATACTGAATATCTAAATATTATTATTACTT2016540.1861159275349744No Hit
TTTGGAAGAGATGTATTTATTAGATA2015790.1860467065199431No Hit
ATGTATTTATTAGATAAAAAATCAA1607140.1483304827965519No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC1594390.1471537255410197No Hit
ATGTATTTATTAGATAAAAAATCA1534540.14162988854152142No Hit
TTGGGTAAAACCATACTGCAGACATCT1462650.13499482351405392No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC1430550.132032164070714No Hit
TGTATTTATTAGATAAAAAATCAATG1422740.13131134256752136No Hit
TATGTATTTATTAGATAAAAAATCAAT1396180.128859995688546No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGC1233890.11388149098263836No Hit
GTATTTATTAGATAAAAAATCAATG1231410.1136526001596015No Hit
CTTTGATGATTCATAATAACTTTTCGAATCGCAT1200820.1108293056931913No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA1146850.10584816145153847No Hit
ATTTATTAGATAAAAAATCAATG1113750.10279320732149014No Hit
TGATGTATTTATTAGATAAAAAATCA1110790.10252001504883325No Hit
CAAGAGGTGCACAATCGACCGATCCTGA1101270.10164136963136922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)