FastQCFastQC Report
Fri 14 Jul 2023
SRR8756010_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756010_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59073217
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length18-36
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTATTTATTAGATAAAAAATCAATG21428873.6275102471565077No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCAT14086212.384534094359547No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAAT7850291.3289084967219578No Hit
ATGTATTTATTAGATAAAAAATCAAT3976770.6731934033658604No Hit
AAGAGGTGCACAATCGACCGATCCTGA3919880.6635629815115707No Hit
AAATACTGAATATCTAAATATTATTATTACTT3142390.5319483447126301No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA2695520.45630154186456445No Hit
TATGTATTTATTAGATAAAAAATCAATG2626930.4446905270115897No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC2400810.4064126048865766No Hit
ATGTTAGGGATAACAGGGTAATGCGA2228170.37718785486153567No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAAT2187420.3702896356567139No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC2078310.35181933633307966No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA1779990.3013192933101984No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAA1718740.290950804321356No Hit
CAAGAGGTGCACAATCGACCGATCCTGA1590570.2692540005058468No Hit
CTTTGATGATTCATAATAACTTTTCGAATCGCAT1493900.25288956245602806No Hit
ATGTATTTATTAGATAAAAAATCAATGT1470470.2489232980150717No Hit
TCCGATATAGTGTAACGGCTATCACATCACG1200430.2032105344796103No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA1036890.17552624567576877No Hit
TTGGGTAAAACCATACTGCAGACATCT1020050.1726755460092854No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA993770.16822682942762368No Hit
TTATATAAAGAATGGTACAGCAATTAATATAT983090.16641890351087532No Hit
TAAGAGGTGCACAATCGACCGATCCTGA956590.16193294500958022No Hit
AATGTATTTATTAGATAAAAAATCAATG927430.15699669784362683No Hit
GTTTAGTGGTAAAATCCAACGT925160.15661242894559135No Hit
TTTCCACGTTCTAGCATTCAAGGTCCC826570.13992297050624483No Hit
TAAGGCGGCAGACTTAAGATCTGTTG805820.13641038035900432No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAG797640.1350256580744536No Hit
AAAGAGGTGCACAATCGACCGATCCTGA777250.13157400925024956No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC739460.12517686314594986No Hit
TTTGTTAATAGATAATATACGGATCTTAATA730130.12359746719058824No Hit
TGATGTATTTATTAGATAAAAAATCAATG661380.11195936730515287No Hit
TTTGATGATTCATAATAACTTTTCGAATCGCAT657020.11122130017060015No Hit
TTATATAAAGAATGGTACAGCAATTAATATA654450.11078624683670098No Hit
AAATACTGAATATCTAAATATTATTATTACT653080.11055433124625665No Hit
TATTAGCATGGAATAATAGAAT651030.11020730426785459No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCA648210.10972993057073563No Hit
AAGAGGTGCACAATCGACCGATCCTG642920.1088344316850054No Hit
AGGCGGCCAGGCCGGGAACCATCCCTGTGAGGC631430.106889387791425No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)