FastQCFastQC Report
Fri 14 Jul 2023
SRR8756011_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756011_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59416514
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length18-36
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTATTTATTAGATAAAAAATCAATG33364725.61539507349758No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCAT12151692.0451704723033735No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAAT7126541.1994207536308845No Hit
AAGAGGTGCACAATCGACCGATCCTGA6510381.0957189443998685No Hit
ATGTATTTATTAGATAAAAAATCAAT5938510.9994712917691537No Hit
ATGTTAGGGATAACAGGGTAATGCGA4604640.774976465297173No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAAT4287430.7215889508428582No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC2712430.45651113089536016No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA2623320.4415136169045529No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC2486770.4185317906735491No Hit
ATGTATTTATTAGATAAAAAATCAATGT2372750.39934183954312763No Hit
AAATACTGAATATCTAAATATTATTATTACTT2243680.3776189225776524No Hit
CAAGAGGTGCACAATCGACCGATCCTGA2024880.34079414352716825No Hit
TATGTATTTATTAGATAAAAAATCAATG1870690.3148434457127525No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAA1477860.2487288298334029No Hit
CTTTGATGATTCATAATAACTTTTCGAATCGCAT1439550.24228112743201324No Hit
TTGGGTAAAACCATACTGCAGACATCT1307630.2200785458399663No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA1232280.2073968863269225No Hit
TCCGATATAGTGTAACGGCTATCACATCACG1204000.20263726680430968No Hit
AAGAGGTGCACAATCGACCGATCCTG1087760.18307368217529557No Hit
GTTTAGTGGTAAAATCCAACGT1080520.18185516572042582No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA1058950.17822486186247816No Hit
TTTCCACGTTCTAGCATTCAAGGTCCC988020.1662871032790648No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAATA985130.16580070651738338No Hit
TAAGAGGTGCACAATCGACCGATCCTGA975600.16419677532747884No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAG968710.1630371650548196No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA949810.15985623121544962No Hit
AAAGAGGTGCACAATCGACCGATCCTGA888920.14960823854459046No Hit
TTATATAAAGAATGGTACAGCAATTAATATAT859260.1446163603606903No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC764700.12870159296117575No Hit
TTTGATGATTCATAATAACTTTTCGAATCGCAT762850.1283902317123485No Hit
AATGTATTTATTAGATAAAAAATCAATG752940.12672234523890108No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAA731930.12318629127249035No Hit
ATATTAGCATGGAATAATAGAAT697930.11746397642917927No Hit
TTTTCTTTACTTATTCAATGAAGCGGAG696310.11719132495723328No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGC662700.11153464843124254No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCA633890.10668582811842511No Hit
TTTGTTAATAGATAATATACGGATCTTAATA630520.10611864573542634No Hit
TCGGTGCCCGAGTTGTAATTTGGAGAGGGCA623350.10491191051699869No Hit
AGGCGGCCAGGCCGGGAACCATCCCTGTGAGGC608090.10234360097261849No Hit
TTTGCTCGAATATATTAGCATGGAATA598670.10075818315426584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)