FastQCFastQC Report
Fri 14 Jul 2023
SRR8756012_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756012_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107837001
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGCTCGAATATATTAGCATGGAATAATAGAAT56556845.244659947470163No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCAT51598204.784832619742457No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAAT14745451.3673831674899786No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAA9981200.9255821199997948No Hit
AAGAGGTGCACAATCGACCGATCCTGA9868200.9151033419410468No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCA7139240.6620399244967875No Hit
ATGTTAGGGATAACAGGGTAATGCGA6094270.5651371925671412No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAATA4415750.4094837540966111No Hit
ATGTATTTATTAGATAAAAAATCAATG4301700.39890760686121085No Hit
TTTGATGATTCATAATAACTTTTCGAATCGCAT3433860.3184305913700252No Hit
AAGAGGTGCACAATCGACCGATCCTG2682930.24879493820493026No Hit
CAAGAGGTGCACAATCGACCGATCCTGA2519150.23360720129818893No Hit
TAAGGCGGCAGACTTAAGATCTGTTG2504070.2322087944563666No Hit
TAAGAGGTGCACAATCGACCGATCCTGA2469840.22903455929750866No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAA2336690.2166872203725324No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC2293360.2126691190160231No Hit
TTTTCTTTACTTATTCAATGAAGCGGAG2160030.20030508823219223No Hit
AAAGAGGTGCACAATCGACCGATCCTGA1975560.18319871488265888No Hit
TTTGCTCGAATATATTAGCATGGAATA1913150.17741127648755736No Hit
AAATACTGAATATCTAAATATTATTATTACTT1910410.17715718930277002No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA1746060.161916594842989No Hit
ATATTAGCATGGAATAATAGAAT1640900.15216483996990976No Hit
AGGCGGCCAGGCCGGGAACCATCCCTGTGAGGC1636360.151743834196576No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA1616150.14986970937739635No Hit
GCGTAGTCGGTAGCGCCTCCCT1550880.1438170558916044No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGA1456540.1350686672007876No Hit
TAAGGAGGCAGACTTAAGATCTGTTG1453950.13482848989837912No Hit
TCTGACTTCTAATCAGAAGATTATGGGT1398360.12967348748877022No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC1373290.1273486824805152No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA1244580.11541307607395351No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAG1221560.11327837279154304No Hit
ATTGCTCGAATATATTAGCATGGAATAATAGAAT1200030.11128184100742936No Hit
TTGATGATTCATAATAACTTTTCGAATCGCAT1184830.10987230625970393No Hit
GCGTAGTCGGTAGCGCTCTCCCT1173150.108789190085136No Hit
ATTCCAGGGGGCATGCCTGTTTGAGCGTCATTT1139900.10570583282448665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)