FastQCFastQC Report
Fri 14 Jul 2023
SRR8756013_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756013_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94719334
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGCTCGAATATATTAGCATGGAATAATAGAAT43268744.568100109318759No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCAT41566724.388409234380807No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAAT24138192.548391018036508No Hit
AAGAGGTGCACAATCGACCGATCCTGA14669801.5487651127276718No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAA7783590.8217530330185809No Hit
ATGTTAGGGATAACAGGGTAATGCGA7562850.7984483928064782No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAATA7374360.778548548493806No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCA6149890.6492750466340905No Hit
ATGTATTTATTAGATAAAAAATCAATG5972120.6305069670358957No Hit
AAGAGGTGCACAATCGACCGATCCTG4060470.4286843908763126No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAA3873310.40892496140228346No Hit
TTTGATGATTCATAATAACTTTTCGAATCGCAT3227620.34075619661768314No Hit
CAAGAGGTGCACAATCGACCGATCCTGA2818690.2975833846129028No Hit
TTTTCTTTACTTATTCAATGAAGCGGAG2399510.2533284281749701No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC2357060.2488467665957195No Hit
TAAGAGGTGCACAATCGACCGATCCTGA2208340.23314564268367852No Hit
ATATTAGCATGGAATAATAGAAT2169930.22909050437368997No Hit
AAAGAGGTGCACAATCGACCGATCCTGA2032680.2146003264761131No Hit
TTTGCTCGAATATATTAGCATGGAATA1896150.20018616262652353No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA1871980.19763441326561693No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC1756970.1854922248503141No Hit
ATTGCTCGAATATATTAGCATGGAATAATAGAAT1695990.17905425728605734No Hit
TCTGACTTCTAATCAGAAGATTATGGGT1597410.1686466672157978No Hit
ATAAATCATTTGTATACGACTTAGAT1527770.1612944195743606No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA1474200.15563876325397305No Hit
TTGATGATTCATAATAACTTTTCGAATCGCAT1448280.15290225752643066No Hit
TTTCCACGTTCTAGCATTCAAGGTCCC1363030.14390198309460242No Hit
AGGCGGCCAGGCCGGGAACCATCCCTGTGAGGC1322640.13963780615264884No Hit
AAATACTGAATATCTAAATATTATTATTACTT1316150.13895262397009675No Hit
TTGGGTAAAACCATACTGCAGACATCT1249300.1318949307646103No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAG1240890.13100704445409211No Hit
AGAGGTGCACAATCGACCGATCCTGA1198210.1265011006095123No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGA1158740.1223340527288758No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA1087280.11478965846613745No Hit
GTTTAGTGGTAAAATCCAACGT1034260.10919206843240685No Hit
TAAGGCGGCAGACTTAAGATCTGTTG1023010.10800434893260547No Hit
TTTCTTTACTTATTCAATGAAGCGGAG1009550.10658330853550975No Hit
ATATAGATGGATACGAATAAGGCGTC996030.10515593363441512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)