FastQCFastQC Report
Fri 14 Jul 2023
SRR8756014_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8756014_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85689500
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTGATGATTCATAATAACTTTTCGAATCGCAT39112214.564411042193034No Hit
ATATTAGCATGGAATAATAGAAT26116583.047815660028358No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAAT25902403.0228207656714066No Hit
ATTAGCATGGAATAATAGAAT10624341.2398648609222833No Hit
TTTGCTCGAATATATTAGCATGGAAT10076441.1759247048938317No Hit
AAGAGGTGCACAATCGACCGATCCTGA8593611.0028778321731369No Hit
ATATTAGCATGGAATAATAGAATA6777940.7909883941439733No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAAT6227600.726763489108934No Hit
TTTGCTCGAATATATTAGCATGGAATAAT5237260.6111904025580731No Hit
ATTAGCATGGAATAATAGAATA4840750.5649175219834401No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAA4725260.5514397913396624No Hit
TATTAGCATGGAATAATAGAAT4205100.4907369047549583No Hit
ATATTAGCATGGAATAATAGAA3918490.4572893995180273No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGCA3822890.4461328400795897No Hit
TTTTGATGATTCATAATAACTTTTCGAATCGC3304670.38565635229520534No Hit
TTTGATGATTCATAATAACTTTTCGAATCGCAT2695270.3145391208957924No Hit
TAAGGCGGCAGACTTAAGATCTGTTG2689240.31383541740820053No Hit
AAGAGGTGCACAATCGACCGATCCTG2334980.27249312926321195No Hit
TAAGAGGTGCACAATCGACCGATCCTGA2202250.25700348350731417No Hit
TTTTCTTTACTTATTCAATGAAGCGGAG2073140.2419362932447966No Hit
ATGTATTTATTAGATAAAAAATCAATG2068660.24141347539663552No Hit
AAAGAGGTGCACAATCGACCGATCCTGA1725210.20133271871116062No Hit
TATTAGCATGGAATAATAGAATA1712700.1998727965503358No Hit
AGGCGGCCAGGCCGGGAACCATCCCTGTGAGGC1642270.19165358649542827No Hit
TAAGGAGGCAGACTTAAGATCTGTTG1594530.1860823088009616No Hit
CAAGAGGTGCACAATCGACCGATCCTGA1582820.18471574697016555No Hit
TTGCTCGAATATATTAGCATGGAAT1436830.16767865374404098No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAATA1328200.15500148793025983No Hit
TATATTAGCATGGAATAATAGAAT1245050.14529784862789488No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC1233210.14391611574346916No Hit
TTTGCTCGAATATATTAGCATG1089630.12716027051155626No Hit
AAATACTGAATATCTAAATATTATTATTACTT1024230.11952806353170459No Hit
TTGCTCGAATATATTAGCATGGAATAATAGAA1016490.11862480233867626No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA970800.11329276048990833No Hit
TTGATGATTCATAATAACTTTTCGAATCGCAT962320.1123031409916034No Hit
AGTTTCTTTACTTATTCAATGAAGCGGAG948280.11066466719959855No Hit
TTGCTCGAATATATTAGCATGGAATAAT926330.10810309314443427No Hit
TTTGATGATTCATAATAACTTTTCGAATCGC926090.10807508504542564No Hit
AATTAGCATGGAATAATAGAAT887880.10361596228242666No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)