FastQCFastQC Report
Fri 14 Jul 2023
SRR8763417_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763417_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2913756
Total Bases148.6 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1012713.475617038626433No Hit
AGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT932923.2017780486766907No Hit
GGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT866282.973069810924456No Hit
GACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT106790.366502891800137No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA99240.34059131924567465No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCCGTCCATCTCGTAT69580.23879830706483315TruSeq Adapter, Index 4 (97% over 37bp)
GAAGAGCACACGTCTGAACTCCAGTCACTGCCGTCCATCTCGTATGCCGT36050.12372346895210169TruSeq Adapter, Index 4 (96% over 32bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)