FastQCFastQC Report
Fri 14 Jul 2023
SRR8763552_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763552_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4810431
Total Bases245.3 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAATCTCGTAT205857142.7938993408283TruSeq Adapter, Index 18 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAATCTCGTATG1966014.086972664195787TruSeq Adapter, Index 18 (97% over 36bp)
GAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAATCTCGTATGCCGT1174092.4407168505275307TruSeq Adapter, Index 18 (96% over 32bp)
CGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAATCTCGTATGCC322550.6705220384618343TruSeq Adapter, Index 18 (97% over 34bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAAGCTCGTAT216040.44910736688666775TruSeq Adapter, Index 18 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAACCTCGTAT203950.42397448378326186TruSeq Adapter, Index 18 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAAACTCGTAT188220.3912747111433466TruSeq Adapter, Index 18 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAAACTCGTATG108080.2246784123917379TruSeq Adapter, Index 18 (97% over 36bp)
TCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCTACAATCTCGTATGC83370.1733108738073574TruSeq Adapter, Index 18 (97% over 35bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCAGATCGGAAGAGCACACGT73420.15262665653036078TruSeq Adapter, Index 1 (97% over 36bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)