FastQCFastQC Report
Fri 14 Jul 2023
SRR8763648_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763648_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4089996
Total Bases208.5 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGAGGAGATCTCGTATG307440.751687776711762TruSeq Adapter, Index 19 (97% over 36bp)
GCCGGAGGCGCGCGCTGCCTTCCACAATCGGGGAGACGGCGTTCCACGGG136630.33405900641467623No Hit
CGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGA131490.32149175696015353No Hit
GGAACGGCGACGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGT129890.3175797726941542No Hit
GTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGTG107730.26339879061006416No Hit
GTCGAATGGGGAGCCCACAGGCCAGCGTCCGGAGCGCGCAGATGCCGAAG100600.24596601072470486No Hit
GTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCC87200.2132031424969609No Hit
GTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCT80590.19704175749805136No Hit
GCGGTTATGAGTACGACCGGGCGTGGACGGCATTCGGTCCTCCGGATTTT71840.17564809354336777No Hit
CCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACC62700.15330088342384687No Hit
GGCGGCCAAAGCCCGGGCTCTCGATACGCCCGTGGAACGCCGTCTCCCCG62460.152714085783947No Hit
CCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGA61390.15009794630605997No Hit
GCCGGCGATGCGCCCCGGTCGGATGTGGAACGGCGACGAGCCGGTCCGCC61080.1493399993545226No Hit
GGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGAGCCTCG56640.13848424301637458No Hit
GGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAT53870.13171162025586333No Hit
CGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGT53250.1301957263527886No Hit
GCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATGCCGCTTGTAA50680.12391210162552727No Hit
CGAATGGGGAGCCCACAGGCCAGCGTCCGGAGCGCGCAGATGCCGAAGCA49130.12012236686784045No Hit
CCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGA48310.11811747493151582No Hit
GTCGGCGGGAGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCC48280.11804412522652835No Hit
GGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCAT48140.1177018266032534No Hit
CCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAG47840.11696832955337853No Hit
GGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAA46790.1144010898788165No Hit
GGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAG46620.11398544155055408No Hit
CGGCGACGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGTGGAT45350.11088030403941715No Hit
GCCAAATCCTGAAGAAAGCTAAAAAGCGCTGTTTGATGAGCCTGCGTAGT45180.11046465571115474No Hit
CCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTG44620.10909546121805498No Hit
CCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACC42170.10310523531074359No Hit
GCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTTAGCTACTAAGA42020.10273848678580616No Hit
GGGCAATGCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGG41050.10036684632454408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)