FastQCFastQC Report
Fri 14 Jul 2023
SRR8763652_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763652_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13138743
Total Bases656.9 Mbp
Sequences flagged as poor quality0
Sequence length50
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGTTACCATCTCGTATG410820.3126783132907006TruSeq Adapter, Index 2 (97% over 36bp)
GGAACGGCGACGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGT389500.2964514946368918No Hit
GTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCC385520.2934222855260964No Hit
CGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGA368850.28073461822032747No Hit
GCCGGAGGCGCGCGCTGCCTTCCACAATCGGGGAGACGGCGTTCCACGGG356700.2714871582464167No Hit
GTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGTG329440.25073935916091816No Hit
CCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACC241440.1837618712840338No Hit
GTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCT234710.1786396156770857No Hit
GTCGAATGGGGAGCCCACAGGCCAGCGTCCGGAGCGCGCAGATGCCGAAG226520.17240614265763474No Hit
CCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGA217740.16572361602628197No Hit
GGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAG217040.16519084055453404No Hit
GCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATGCCGCTTGTAA215850.1642851222525625No Hit
GCCAAATCCTGAAGAAAGCTAAAAAGCGCTGTTTGATGAGCCTGCGTAGT205990.15678059917908432No Hit
CGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGT193160.1470155858897613No Hit
CCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGA186680.1420836072370089No Hit
GTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCT177180.1348530829775725No Hit
CCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTG171640.13063654567259592No Hit
GGTGAATCGGGTTGAAAGTGAAAGCCGCCAAAAACTGGCGGAATGCTCTC168540.1282771114405693No Hit
GGGCAATGCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGG158840.12089436561777636No Hit
CAGCTCTCTGGGTCCCTACCGACGCTGAGGTGCGAAAGCATGGGGAGCGA158780.12084869914876939No Hit
GCTGACATGAGTAACGAAAAATCCTGTGAAAAACACGATCGCCTGCCAGT157320.11973748173626655No Hit
GCCGGCGATGCGCCCCGGTCGGATGTGGAACGGCGACGAGCCGGTCCGCC157110.11957764909474218No Hit
GGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAA156500.11911337332650468No Hit
CCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGT151630.11540677825877255No Hit
CCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACC150650.11466089259832542No Hit
GCCGAACAGTTCGGGCCAAATCCTGAAGAAAGCTAAAAAGCGCTGTTTGA142680.10859486329856669No Hit
GTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTC141500.107696756074763No Hit
CGGGTGCGTAACGCGTGGGAATCTGCCGAACAGTTCGGGCCAAATCCTGA140340.10681387100729497No Hit
CCCTGATACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCT140200.1067073159129454No Hit
GTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATG138340.10529165537372943No Hit
GTCCGATGCTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGT138110.1051166005758694No Hit
ACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGT136190.10365527356764646No Hit
CTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCAGTTTTTG136140.10361721817680732No Hit
CCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAG134860.10264300017132537No Hit
GGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCAT134840.1026277780149897No Hit
CTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCAGTTT133760.10180578157286432No Hit
GTTCATATTAGGGAAAGGAGAGTGAGGGGAAGAGGGGGCAGCCCTCGGCC133660.10172967079118604No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)