FastQCFastQC Report
Fri 14 Jul 2023
SRR8763884_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763884_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1497182
Total Bases76.3 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT851405.686683382514617No Hit
AGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT806005.383447035831315No Hit
CAGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT563963.766809913557603No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTAT130770.8734409043122346TruSeq Adapter, Index 1 (97% over 37bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA116680.7793307694054564No Hit
GACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT106960.7144088026706172No Hit
AGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA21870.14607442515338814No Hit
GGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA21710.14500575080384348No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTATG20140.13451938374893635TruSeq Adapter, Index 1 (97% over 36bp)
CAGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA17670.11802172347784036No Hit
GAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTATGCCGT17060.11394740252020129TruSeq Adapter, Index 1 (96% over 32bp)
ATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16530.11040741873733453No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)