FastQCFastQC Report
Fri 14 Jul 2023
SRR8763886_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763886_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1560769
Total Bases79.5 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT830385.320326070033426No Hit
AGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT786485.039054466099724No Hit
CAGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT557073.5692021048598477No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA162291.039807940829168No Hit
GACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT106610.6830607219902497No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTAT98960.6340464219881353TruSeq Adapter, Index 1 (97% over 37bp)
GAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTATGCCGT28260.18106459059604593TruSeq Adapter, Index 1 (96% over 32bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTATG17870.1144948419657233TruSeq Adapter, Index 1 (97% over 36bp)
ATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16070.10296206549463757No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)