FastQCFastQC Report
Fri 14 Jul 2023
SRR8763887_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763887_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1595275
Total Bases81.3 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT798315.004215574117315No Hit
AGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT734244.602592029587376No Hit
CAGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT523963.2844493896036733No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA139150.8722634028615756No Hit
GACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT102140.640265784896021No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTAT55670.34896804626161637TruSeq Adapter, Index 1 (97% over 37bp)
GAAGAGCACACGTCTGAACTCCAGTCACATAAGAACATCTCGTATGCCGT16560.10380655372898089TruSeq Adapter, Index 1 (96% over 32bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)