FastQCFastQC Report
Fri 14 Jul 2023
SRR8763890_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8763890_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2267964
Total Bases115.6 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT200880.8857283448943635No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTGTCCGGAATCTCGTATG189110.8338315775735418TruSeq Adapter, Index 4 (97% over 37bp)
GAAGAGCACACGTCTGAACTCCAGTCACTGTCCGGAATCTCGTATGCCGT149360.6585642452878441TruSeq Adapter, Index 4 (96% over 33bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGTCCGGAATCTCGTAT139850.6166323627711904TruSeq Adapter, Index 4 (97% over 38bp)
CAGGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT131080.5779633186417421No Hit
GGACATTCGTCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT117000.5158812044635629No Hit
CGGAAGAGCACACGTCTGAACTCCAGTCACTGTCCGGAATCTCGTATGCC58130.25630918303817873TruSeq Adapter, Index 4 (97% over 35bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA46530.20516198669820154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)