FastQCFastQC Report
Fri 14 Jul 2023
SRR8891623_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8891623_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92070440
Total Bases5.8 Gbp
Sequences flagged as poor quality0
Sequence length63
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCTGTAGGCACCATCAA2548740.2768250048549784No Hit
TAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCTGTAGGCACCATCA1431480.1554766111685792No Hit
TCGCCCCCGGGGAGCCCGGCGGGCGCCGGCGCGCCTGTAGGCACCATCAA1150000.12490436670010484No Hit
TCACCCCCGCGGGGAATCCCCCGCGAGGGGGGTCTGTAGGCACCATCAAT956480.10388567709679675No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)