FastQCFastQC Report
Fri 14 Jul 2023
SRR8891631.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8891631.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144618740
Total Bases7.3 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAAT57020293.942800912246919No Hit
CGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAATC30028242.0763726747999605No Hit
CGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAA13204270.9130400389327137No Hit
TCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCCTGTAGGCACCATCAA9115240.6302945247621435No Hit
CGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCCTGTAGGCACCATCAAT8532980.5900327993453683No Hit
CCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAAT7798160.5392219569884235No Hit
CGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAATT5136720.35519048222934313No Hit
TCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCCTGTAGGCACCATCAATC3085350.21334372018453487No Hit
CACGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAATC2658780.18384754285647903No Hit
CGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCCTGTAGGCACCATCA2546850.17610788200754618No Hit
CGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCCTGTAGGCACCATCAATCT2290500.15838196349933625No Hit
CGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAATA2268560.1568648710395347No Hit
CGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCCTGTAGGCACCATCAAT2246480.15533809795328046No Hit
ACGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAAT2136560.14773742324127564No Hit
TCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCCTGTAGGCACCATCAATT1834780.1268701414491649No Hit
GCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAAT1762100.12184451337357802No Hit
TGCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCTGTAGGCACCATCAATC1738470.12021056192302601No Hit
CCGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCGCCTGTAGGCACCATCAA1720870.11899356888325816No Hit
GCGCGGCGCCTCGCCTCGGCCGGCGCCTAGCCTGTAGGCACCATCAATCT1630000.11271015084213844No Hit
TCGCGCGAGGGAGGGCGCGTGCCCCGCCGCGCGCTGTAGGCACCATCAAT1574610.10888008013345987No Hit
CGCGCGCGGGAGGGCGCGTGCCCCGCCGCGCCTGTAGGCACCATCAATCC1475670.1020386431246739No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)