FastQCFastQC Report
Fri 14 Jul 2023
SRR8907200_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8907200_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4266656
Total Bases324.2 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGCTCTAGAAGATCG157740.3697040492601231No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGGTCTAGAAGATCG86670.2031333203333008No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGATCTAGAAGATCG83500.19570361425903562No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGCGCTAGAAGATCG66320.1554378885947215No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGCTCTAGAAGATCG58670.13750815627039067No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGGACTAGAAGATCG54290.12724250560626402No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTACTCTAGAAGATCG52650.123398745996865No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)