FastQCFastQC Report
Fri 14 Jul 2023
SRR8907202_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8907202_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7182636
Total Bases545.8 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGCGGCATAAGATCG337430.4697857443980177No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGGCGCATAAGATCG181320.2524421396267331No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGCTGCATAAGATCG174450.24287740601082944No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGCTGCATAAGATCG161590.22497311571963272No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTCGCGCATAAGATCG154130.21458695665491054No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGCTCTGCATAAGATCG152590.21244289700884186No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGCGGCATAAGATCG146500.20396411568120673No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGGGGCATAAGATCG130240.1813261872103779No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTGCCGCATAAGATCG122530.1705919665148004No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGCTCGCATAAGATCG117360.1633940519887128No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTAGCGCATAAGATCG109560.15253452910602738No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTCTCGCATAAGATCG92020.12811452508521942No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGGGCCGCATAAGATCG91350.1271817199145272No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGCGATGCATAAGATCG87150.12133428451615814No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGCTCGGCATAAGATCG84610.11779797834666828No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGTTGCGCATAAGATCG82360.11466542366897056No Hit
CTCAGGTGATTCATAGTAACCGAACGGATCGCGTGATGCGCATAAGATCG76600.10664608369406442No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)