FastQCFastQC Report
Tue 26 Sept 2023
SRR942869.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR942869.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144718737
Total Bases8.2 Gbp
Sequences flagged as poor quality0
Sequence length57
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAACCTCAACTCATATGGGACTACCCCCTGAATTCTGTAGGCACCATCA48358793.341570760115188No Hit
TTGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA47137473.2571780943610644No Hit
TGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCAC41040542.8358829582654526No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGAATCTGTAGGCACCATCAA38095362.632372337522542No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGAACTGTAGGCACCATCAAT33965772.3470195155171925No Hit
ACGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATTCGTA30225152.0885443465416644No Hit
TTTGCCAAAGATGTTTTCATTAATCAAGAACGAACTGTAGGCACCATCAA13722260.9482020286011755No Hit
TGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCACCA11757680.8124504292764799No Hit
TTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCACTGTAGGCACCA10773280.7444288295578477No Hit
ACCGCTTGGGAACACCGCGTGTTGTTGGCCTCTGTAGGCACCATCAATTC9971310.6890130612458288No Hit
TTTGCCAAAGATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT9660430.667531392289583No Hit
TTGCCAAAGATGTTTTCATTAATCAAGAACGAACTGTAGGCACCATCAAT9338250.6452688983873595No Hit
TTTTGCCAAAGATGTTTTCATTAATCAAGAACGAACTGTAGGCACCATCA8861270.6123097937207674No Hit
TAACGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATTCG8852040.6116720048489643No Hit
AGGTCGTATCCGTGCTGGACTGCAATGATAACTGTAGGCACCATCAATTC7584440.5240814117939683No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGACTGTAGGCACCATCAATT6960340.48095638092806187No Hit
AGCATTGTGATGGCCCTAGCGGGTGTTGACACAATGCTGTAGGCACCATC6734020.4653177701516287No Hit
TTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCAT6595600.45575301006116437No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGCTGTAGGCACCATCAATTCG6213030.42931759416888776No Hit
ATGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA5892940.40719951833189366No Hit
TTTTGCCAAAGATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAA5850930.4042966461212275No Hit
TTGCCAAAGATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAATT5337200.3687981328913892No Hit
AACTCCATCTAAAACTAAATATAACCATGAGACCGACTGTAGGCACCATC4887930.3377537768312613No Hit
AGGGAATACGGTTCCAATTCCGTAACCTGTTGAGCTGTAGGCACCATCAA4719140.32609046332404074No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCACTGTAGGCACC4517770.3121758863885054No Hit
TTGTGCTTTTATTAGGCTAAAACCAAGCGCTGTAGGCACCATCAATTCGT4307300.29763250352302345No Hit
AACTCTAAGCGGTGGATCACTCGGCTCATGGGTCGCTGTAGGCACCATCA4202240.29037290451201214No Hit
AACTCCATCTAAAACTAAATATAACCATGAGACCGCTGTAGGCACCATCA4138950.2859995938190091No Hit
TAACCAAACGTAATGTTACGGTGCCCAAATTAACAACCTGTAGGCACCAT4113080.2842119883895891No Hit
TTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCACC4011600.277199765777392No Hit
AACGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATTCGT3849700.26601254818855974No Hit
TGGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA3845820.2657444419239231No Hit
CGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATTCGTAT3794760.2622162187609473No Hit
TAAGGTCGTATCCGTGCTGGACTGCAATGATAACTGTAGGCACCATCAAT3781740.26131654258425435No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGAATTTCTGTAGGCACCATC3774320.2608038239029132No Hit
ATATGGCAAATGTGAGATGCAGTGTATGGAGCGCTGTAGGCACCATCAAT3537910.24446799863931923No Hit
ATAACCTCAACTCATATGGGACTACCCCCTGAATTCTGTAGGCACCATCA3493520.2414006694931286No Hit
TGTGCTTTTATTAGGCTAAAACCAAGCGCTGTAGGCACCATCAATTCGTA3290310.22735894938054912No Hit
ACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTCTGTAGGCACCATC3262650.22544765575172204No Hit
AAGCATTGTGATGGCCCTAGCGGGTGTTGACACAATGCTGTAGGCACCAT3239620.22385629305208765No Hit
ATGGCAAATGTGAGATGCAGTGTATGGAGCGCTGTAGGCACCATCAATTC3081910.21295860258924176No Hit
ATATGGCAAATGTGAGATGCAGTGTATGGAGCGTCCTGTAGGCACCATCA3074810.21246799576477784No Hit
TGGAACGTACCTTGAGCATATATGCTGTGACCCGACTGTAGGCACCATCA3044800.2103943181870085No Hit
TGGGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCAC2946950.2036329269512627No Hit
TCGCAAAAGTTGACCGAACTTGATTATTTAGCTGTAGGCACCATCAATTC2897120.20018969623815885No Hit
TAACCAAACGTAATGTTACGGTGCCCAAATTAACAACTCCTGTAGGCACC2893310.19992642694221413No Hit
ATAACCTCAACTCATATGGGACTACCCCCTGAATCTGTAGGCACCATCAA2766760.19118187854279023No Hit
TTTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCAC2581760.1783984612856316No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCA2553080.1764166861130083No Hit
ATGGCAAATGTGAGATGCAGTGTATGGAGCTGTAGGCACCATCAATTCGT2541360.1756068393548791No Hit
ATAACCTCAACTCATATGGGACTACCCCCTGAACTGTAGGCACCATCAAT2506870.1732235957808283No Hit
TTGGGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA2486880.17184229572152776No Hit
AACTCTAAGCGGTGGATCACTCGGCTCATGGGCTGTAGGCACCATCAATT2452860.16949152893726538No Hit
CGCTAGTTACATATAAAAGCATTATTTAATACAATGACCTGTAGGCACCA2412900.16673031080971915No Hit
AGTTACATATAAAAGCATTATTTAATACAATGACCTGTAGGCACCATCAA2358660.1629823510690257No Hit
ATGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATTCGTA2322870.16050927807641108No Hit
ATGTGCTTTTATTAGGCTAAAACCAAGCGCTGTAGGCACCATCAATTCGT2305160.1592855249973609No Hit
TGAACCAAACGTAATGTTACGGTGCCCAAATTAACAACCTGTAGGCACCA2211800.152834390753424No Hit
TTTTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA2137160.14767680013680606No Hit
ACTACCTCAACTCATATGGGACTACCCCCTGAATTCTGTAGGCACCATCA2074930.14337673496970887No Hit
TACGGACCAAGGAGTCTAACATATGTGCAAGTTATTGGGCTGTAGGCACC2036070.14069152635017815No Hit
CTGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA1972380.1362905758360785No Hit
ATATGGCAAATGTGAGATGCAGTGTATGGAGCTGTAGGCACCATCAATTC1964950.13577716615920993No Hit
AATTAACGATTTAAGTCCTTCTTAAATGAGGCCACTGTAGGCACCATCAA1948590.13464669747636063No Hit
TCGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA1946440.13449813343796663No Hit
TCGTATCCGTGCTGGACTGCAATGATAACTGTAGGCACCATCAATTCGTA1891630.13071078695221064No Hit
GTGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGCTGTAGGCA1880900.12996934875129543No Hit
ATTGAATTATTTAGTGAGGTCTCCGGACGTGACTGTAGGCACCATCAATT1849470.12779754980863328No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGCACTGTAGGCACCATC1787770.12353410740448903No Hit
AAATTAACGATTTAAGTCCTTCTTAAATGAGGCCACTGTAGGCACCATCA1782350.12315958782863065No Hit
TCGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATTCGTA1767870.1221590263049352No Hit
ACGCGAAGGTCGCGGGTTCGTTCCCCTCATGGGCCACCACTGTAGGCACC1711190.11824246365555277No Hit
TGGAACGTACCTTGAGCATATATGCTGTGACCCGCTGTAGGCACCATCAA1707440.11798334033277252No Hit
ACCAAACGTAATGTTACGGTGCCCAAATTAACAACCTGTAGGCACCATCA1695520.11715967366409508No Hit
ACTACCTCAACTCATATGGGACTACCCCCTGAATCTGTAGGCACCATCAA1645680.1137157519554638No Hit
TTGCGGTTAAAACGTTCGTAGTTGAACTTGTGCTGTAGGCACCATCAATT1638080.11319059535462918No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCATCA1635940.11304272231176257No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATTGGACCTGTAGGCACCATCAATT1626580.11239595049810308No Hit
TTGGCAAATGTGAGATGCAGTGTATGGAGCGCTGTAGGCACCATCAATTC1611470.11135185625618058No Hit
AAGGTCGTATCCGTGCTGGACTGCAATGATAACTGTAGGCACCATCAATT1586390.1096188394734263No Hit
AGGAGTCTAACATATGTGCAAGTTATTGGGCTGTAGGCACCATCAATTCG1562620.10797634310476328No Hit
ATATGGCAAATGTGAGATGCAGTGTATGGAGCGTCACTGTAGGCACCATC1506420.10409294824069672No Hit
ACTACCTCAACTCATATGGGACTACCCCCTGAACTGTAGGCACCATCAAT1468880.10149895103078463No Hit
ATGGCAAATGTGAGATGCAGTGTATGGAGCGTCCTGTAGGCACCATCAAT1457230.10069394124134735No Hit
ACCGCTGAACCACTTTCATGCTTGGGATTGTGAACTGCTGTAGGCACCAT1447980.10005477037848942No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)