Basic Statistics
Measure | Value |
---|---|
Filename | SRR9596307_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 56889866 |
Total Bases | 2.9 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 52 |
%GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CCGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCGTCTT | 112396 | 0.19756770037039637 | TruSeq Adapter, Index 3 (100% over 48bp) |
ACGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCGTCTT | 86533 | 0.15210617652008532 | TruSeq Adapter, Index 3 (98% over 50bp) |
TCGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCGTCTT | 81675 | 0.14356687006434504 | TruSeq Adapter, Index 3 (100% over 48bp) |