FastQCFastQC Report
Thu 28 Sept 2023
SRR9730186.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR9730186.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8011005
Total Bases320.4 Mbp
Sequences flagged as poor quality0
Sequence length40
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA213450.2664459702621581No Hit
CTATTGTAGGCATTAACGCGAACTCGGCCTACAATAGTGA133650.16683300035388818No Hit
TCGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA123120.1536885821441879No Hit
CGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA115460.14412673565925874No Hit
GCGTTAATGGCATTAACGCGAACTCGGCCTACAATAGTGA83400.10410678809962046No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)