FastQCFastQC Report
Thu 28 Sept 2023
SRR9730204.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR9730204.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9646301
Total Bases385.8 Mbp
Sequences flagged as poor quality0
Sequence length40
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA402790.41755902081015306No Hit
CTATTGTAGGCATTAACGCGAACTCGGCCTACAATAGTGA290760.3014212390842873No Hit
CGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA229290.23769733082142055No Hit
TCGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA214020.22186742876880994No Hit
GCGTTAATGGCATTAACGCGAACTCGGCCTACAATAGTGA166090.17217998899267192No Hit
CAGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA133880.138788951329634No Hit
AAGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA133770.13867491798151438No Hit
ACGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA131370.13618691765890364No Hit
GCGTTAAAGGCATTAACGCGAACTCGGCCTACAATAGTGA119070.12343591600552377No Hit
GCGTTATAGGCATTAACGCGAACTCGGCCTACAATAGTGA110940.11500781491268No Hit
AGCGTTATGGCATTAACGCGAACTCGGCCTACAATAGTGA110330.11437544816401644No Hit
ACTATTGTGGCATTAACGCGAACTCGGCCTACAATAGTGA104200.10802068067334826No Hit
ACATTGTAGGCATTAACGCGAACTCGGCCTACAATAGTGA102130.10587478039509654No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)