FastQCFastQC Report
Fri 29 Sept 2023
SRR9730206.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR9730206.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2595087
Total Bases103.8 Mbp
Sequences flagged as poor quality0
Sequence length40
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA75320.2902407510807923No Hit
CTATTGTAGGCATTAACGCGAACTCGGCCTACAATAGTGA56260.21679427317851No Hit
CGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA53860.20754602832197916No Hit
TCGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA39780.15328965849699835No Hit
CAGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA31740.12230803822762013No Hit
ACGCGTTAGGCATTAACGCGAACTCGGCCTACAATAGTGA27690.10670162503222434No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)