FastQCFastQC Report
Fri 29 Sept 2023
SRR9730207.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR9730207.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10862715
Total Bases434.5 Mbp
Sequences flagged as poor quality0
Sequence length40
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAAAAAA189870.17479055650452027No Hit
AGCCGAGTGGCATTAACGCGAACTCGGCCTACAATAGTTC143570.13216769472456932No Hit
AGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTTC113180.10419126341803131No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)