FastQCFastQC Report
Tue 27 Jun 2023
SRR987018.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR987018.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9660224
Total Bases492.6 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGGTGTAGCTCAATTGGTAGAGCAACTGAAAAAAAAAAAAAAAAAAAA2033202.1047130998204597No Hit
ACGACGTGGGGGTTCGAGTCCCTTCACCCGCACCAAAAAAAAAAAAAAAA1801701.86507062362115No Hit
TAACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACCAAAAAAAAAAAAAAA1210031.2525900020537826No Hit
ACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACCAAAAAAAAAAAAAAAAA1080111.1181003670308265No Hit
TTCTGGACGTGGGTTCGACTCCCACCGTCTCCACCAAAAAAAAAAAAAAA564780.5846448281116462No Hit
ACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCACCAAAAAAAAAAAAAAA560550.5802660476610066No Hit
ACAACAGGTTGATATTCCTGTACCACCTCCTCACCAAAAAAAAAAAAAAA556890.5764773156398858No Hit
TCTGGACGTGGGTTCGACTCCCACCGTCTCCACCAAAAAAAAAAAAAAAA543080.5621815808825965No Hit
AACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACCAAAAAAAAAAAAAAAA413960.4285200840063336No Hit
ACGGCGGTAACACGGGTTCGAATCCCGTACGGGAAAAAAAAAAAAAAAAA373280.38640925924699054No Hit
ATGACGTGGGGGTTCAAGTCCCTTCACCCGCACCAAAAAAAAAAAAAAAA369590.38258947204536875No Hit
TAACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACAAAAAAAAAAAAAAAA307160.3179636414228076No Hit
ACGACGTGGGGGTTCGAGTCCCTTCACCCGCACAAAAAAAAAAAAAAAAA302070.3126946124644729No Hit
ACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACAAAAAAAAAAAAAAAAAA239240.24765471276856518No Hit
TGCCGGTGTAGCTCAATTGGTAGAGCAACTGAAAAAAAAAAAAAAAAAAA231470.23961142101880864No Hit
TGCGTTGGTTCGAATCCAGCTAGCCCAGCCAAAAAAAAAAAAAAAAAAAA227910.23592620626602445No Hit
ACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCAAAAAAAAAAAAAAA211510.21894937425881636No Hit
GCGGAAGTAGTTCAGTGGTAGAACACCACCAAAAAAAAAAAAAAAAAAAA206490.2137528073883173No Hit
ACCGGGATGGACGCACCGCTGGTGTACCAGTAAAAAAAAAAAAAAAAAAA205930.21317311068563216No Hit
TTTCTGGACGTGGGTTCGACTCCCACCGTCTCCACCAAAAAAAAAAAAAA195740.202624701042129No Hit
GCGGTCGTGGCGGAATGGCAGGCGCGCTAGGAAAAAAAAAAAAAAAAAAA193070.1998607899775409No Hit
TTCTGGACGTGGGTTCGACTCCCACCGTCTCCACAAAAAAAAAAAAAAAA192370.19913616909918447No Hit
TACCGTGCCGGTTCAAGTCCGGCCCTCGGCACCAAAAAAAAAAAAAAAAA189350.1960099475954181No Hit
TTAACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACCAAAAAAAAAAAAAA188450.19507829218038839No Hit
TTACCGTGCCGGTTCAAGTCCGGCCCTCGGCACCAAAAAAAAAAAAAAAA175840.18202476464313871No Hit
ATCAAAAGGTTAGGGGTTCGACTCCTCTCGGAAAAAAAAAAAAAAAAAAA174660.1808032608767664No Hit
TTGCGTTGGTTCGAATCCAGCTAGCCCAGCCAAAAAAAAAAAAAAAAAAA174540.18067904015476247No Hit
GCCGGTGTAGCTCAATTGGTAGAGCAACTGAAAAAAAAAAAAAAAAAAAG170330.17632096315779014No Hit
ACGTGGGGGTTCGAGTCCCTTCACCCGCACCAAAAAAAAAAAAAAAAAAA170220.17620709416261984No Hit
ACGACGTGGGGGTTCGAGTCCCTTCACCCGCACCGAAAAAAAAAAAAAAA167080.1729566519368495No Hit
ACAACAGGTTGATATTCCTGTACCACCTCCTCACAAAAAAAAAAAAAAAA166400.1722527345121604No Hit
TGGAGTGTCGGTTCGACCCCGACCACCGGTACCAAAAAAAAAAAAAAAAA163400.16914721646206135No Hit
TCTGGACGTGGGTTCGACTCCCACCGTCTCCACAAAAAAAAAAAAAAAAA156570.1620769870346692No Hit
TACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACCAAAAAAAAAAAAAAAA152730.1581019239305424No Hit
TTGACGTGGGGGTTCAAGTCCCTTCACCCGCACCAAAAAAAAAAAAAAAA147010.15218073618168687No Hit
ACCGTGCCGGTTCAAGTCCGGCCCTCGGCACCAAAAAAAAAAAAAAAAAA137500.14233624396287292No Hit
ACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCACAAAAAAAAAAAAAAAA136790.1416012713576828No Hit
ACGGCGGTAACACGGGTTCGAATCCCGTACGGGTAAAAAAAAAAAAAAAA128200.13270913800756587No Hit
ACGACGTGGGGGTTCGAGTCCCTTCACCCGCATCAAAAAAAAAAAAAAAA126370.13081477199700545No Hit
GCCGGTGTAGCTCAATTGGTAGAGCAACCGAAAAAAAAAAAAAAAAAAAA117110.12122907294903308No Hit
ACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCAAAAAAAAAAAAAAAAAA117080.12119801776853208No Hit
ACGTGGGGGTTCAAGTCCCTTCACCCGCACCAAAAAAAAAAAAAAAAAAA115480.11954174147514592No Hit
TAACCCGTGGAGGTTCAAGTCCTCTCGGCCGCACCGAAAAAAAAAAAAAA114510.11853762397228056No Hit
TCAGGGTTCGGCAGTTCGAATCTGCCCCCCTCCACCAAAAAAAAAAAAAA112500.11645692687871419No Hit
TAACCCGTGGAGGTTCAAGTCCTCTCGGCCGCATCAAAAAAAAAAAAAAA105790.109510918173326No Hit
GCCGGTGTAGCTCAATTGGTAGAGCAACTAAAAAAAAAAAAAAAAAAAAA104490.10816519368494974No Hit
ATGACGTGGGGGTTCAAGTCCCTTCACCCGCACAAAAAAAAAAAAAAAAA104210.10787534533360718No Hit
ACGGCGGTAACACGGGTTCGAATCCCGTACGAAAAAAAAAAAAAAAAAAA102890.1065089173915636No Hit
ACGACGTGGGGGTTCGAGTCCCTTCACCCGCACTAAAAAAAAAAAAAAAA102440.10604308968404873No Hit
TCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAAAAAAAAAAAAAAAAAAA101790.10537022743986062No Hit
TCCACAGTAGCTCAGTGGTAGAGCTATCGGCAAAAAAAAAAAAAAAAAAA100040.1035586752439695No Hit
TTGTAACACCCGAAGTCGGTGAGGTAACCTAAAAAAAAAAAAAAAAAAAA96760.10016330884252789No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)