RiboMetric

Read Frame Distribution Metagene Profile Metagene Heatmap mRNA Reads Breakdown mRNA Reads Breakdown over Read Length Read Frame Triangle Ligation Bias Distribution Nucleotide Composition Read Length Distribution

RiboMetric Report

Results from your RiboMetric analysis of SRR3494979.bam.trans.bam with Mus_musculus.GRCm39.108_ensembl_RiboMetric.tsv as annotation, completed at 04:07:17 19/11/2023

Summary Report

Read length distribution metric 0.571
Ligation bias distribution metric 0.115
3nt weighted score 0.257
3nt weighted score best 3 read lengths 0.21
Cds coverage metric 0.033

Read Frame Distribution

Frame distribution per read length


Metagene Profile

Metagene profile showing the distance count of reads per distance away from a target (default: start codon).


Metagene Heatmap

Metagene heatmap showing the distance between the A-site and a target per read length and the counts in colorscale.


mRNA Reads Breakdown

Shows the proportion of the different transcript regions represented in the reads


mRNA Reads Breakdown over Read Length

Shows the proportion of the different transcript regions represented in the reads over the different read lengths.


Read Frame Triangle

Triangle plot showing the distribution of read frames for the full dataset


Ligation Bias Distribution

Distribution of end bases for the full dataset


Nucleotide Composition

Nucleotide composition of the reads


Read Length Distribution

Distribution of read lengths for the full dataset