RiboMetric

Read Frame Distribution Metagene Profile Metagene Heatmap mRNA Reads Breakdown mRNA Reads Breakdown over Read Length Read Frame Triangle Ligation Bias Distribution Nucleotide Composition Read Length Distribution

RiboMetric Report

Results from your RiboMetric analysis of SRR3494983.bam.trans.bam with Mus_musculus.GRCm39.108_ensembl_RiboMetric.tsv as annotation, completed at 04:50:57 19/11/2023

Summary Report

Read length distribution metric 0.625
Ligation bias distribution metric 0.138
3nt weighted score 0.232
3nt weighted score best 3 read lengths 0.178
Cds coverage metric 0.03

Read Frame Distribution

Frame distribution per read length

Metagene Profile

Metagene profile showing the distance count of reads per distance away from a target (default: start codon).

Metagene Heatmap

Metagene heatmap showing the distance between the A-site and a target per read length and the counts in colorscale.

mRNA Reads Breakdown

Shows the proportion of the different transcript regions represented in the reads

mRNA Reads Breakdown over Read Length

Shows the proportion of the different transcript regions represented in the reads over the different read lengths.

Read Frame Triangle

Triangle plot showing the distribution of read frames for the full dataset

Ligation Bias Distribution

Distribution of end bases for the full dataset

Nucleotide Composition

Nucleotide composition of the reads

Read Length Distribution

Distribution of read lengths for the full dataset