DRR495770 (PRJDB16373)
Processing Status: Completed
General Details
| Sample Name | SAMD00621650 |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 3/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 65398648 |
|---|---|
| Total Bases | 3269932400 |
| Total Bases | 3269932400 |
Repository Details
| SRA | DRR495770 |
|---|---|
| ENA | DRR495770 |
| BioProject | PRJDB16373 |
Experiment Details
| Title | zt18_1 |
|---|
Sample Details
| Run Accession | DRR495770 |
|---|---|
| Total Number Of Spots (Original File)) | 65398648 |
| Total Number Of Bases (Original File) | 3269932400 |
| Average Read Length | 50 |
| Original File Size (Mb) | 2508 |
| Experiment Id | DRX479941 |
| Library Name | zt18_1_ribo |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | DRP011320 |
| Pubmed Id | 38494830 |
| Sample | DRS369156 |
| Biosample | SAMD00621650 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | SAMD00621650 |
| Center Name | UT_IBIO |
| Submission | DRA016840 |
| Month | 3 |
| Year | 2024 |
| Author | Aoyama |
| Sample Source | 0.0 |
| Sample Title | zt18_1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | biological replicate 1NA |
| Condition | Test |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | Shoot |
| Cell-Line | 0.0 |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 14-day-old |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DRR495770 | Arabidopsis thaliana | 0.0 | 0.0 | Ribo-Seq | 0.0 |  |
 |
 |
 |
|
|
||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About