ERR12268573 (PRJEB69686)
Processing Status: Not Yet Started
General Details
| Sample Name | E-MTAB-13539:AV2-WT_12d_Ribo_seq |
|---|---|
| Organism | Nicotiana benthamiana |
| Release Date | 7/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 48320160 |
|---|---|
| Total Bases | 3672332160 |
| Total Bases | 3672332160 |
Repository Details
| SRA | ERR12268573 |
|---|---|
| ENA | ERR12268573 |
| BioProject | PRJEB69686 |
Experiment Details
| Title | AV2-WT_12d_Ribo_seq |
|---|
Sample Details
| Run Accession | ERR12268573 |
|---|---|
| Total Number Of Spots (Original File)) | 48320160 |
| Total Number Of Bases (Original File) | 3672332160 |
| Average Read Length | 76 |
| Original File Size (Mb) | 1453 |
| Experiment Id | ERX11678790 |
| Library Name | AV2-WT_12d_Ribo_seq_s |
| Library Strategy | OTHER |
| Library Selection | size fractionation |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | ERP154626 |
| Pubmed Id | <NA> |
| Sample | ERS17014224 |
| Biosample | SAMEA114630225 |
| Sample Type | simple |
| Organism Taxid | 4100 |
| Organism | Nicotiana benthamiana |
| Sample Name | E-MTAB-13539:AV2-WT_12d_Ribo_seq |
| Center Name | European Bioinformatics Institute |
| Submission | ERA27404583 |
| Month | 7 |
| Year | 2024 |
| Sample Title | AV2-WT_12d_Ribo_seq |
| Library-Type | Ribo-Seq |
| Condition | Wild Type |
| Tissue | Leaf |
| Age | 3.5 |
| Infected | Asparagus Virus 2 WT |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR12268573 | Nicotiana benthamiana | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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