ERR2382688 (PRJEB25491)
Processing Status: Not Yet Started
General Details
| Sample Name | SAMEA104674696 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 3/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 981937 |
|---|---|
| Total Bases | 48885680 |
| Total Bases | 48885680 |
Repository Details
| SRA | ERR2382688 |
|---|---|
| ENA | ERR2382688 |
| BioProject | PRJEB25491 |
Experiment Details
| Title | 54-Ribo-mRNA-seq, control for 56 |
|---|
Sample Details
| Run Accession | ERR2382688 |
|---|---|
| Total Number Of Spots (Original File)) | 981937 |
| Total Number Of Bases (Original File) | 48885680 |
| Average Read Length | 49 |
| Original File Size (Mb) | 25 |
| Experiment Id | ERX2430912 |
| Library Name | 54-Ribo-mRNA-seq, control for 56_s |
| Library Strategy | RNA-Seq |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina MiSeq |
| Sra Project Accession (Srp) | ERP107411 |
| Pubmed Id | <NA> |
| Sample | ERS2276079 |
| Biosample | SAMEA104674696 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | SAMEA104674696 |
| Center Name | RIKEN Brain Science Institute |
| Submission | ERA1241277 |
| Month | 3 |
| Year | 2018 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | 54-Ribo-mRNA-seq, control for 56 |
| Library-Type | RNA-Seq |
| Replicate-Number | 1.0 |
| Condition | Wild Type |
| Inhibitor | untreated |
| Timepoint | NANA |
| Tissue | 0.0 |
| Cell-Line | 0.0 |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | BY4741 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | wild type genotype_wild type genotype |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | YPD medium |
| Stress | heat shock at 42 degrees celsius |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR2382688 | Saccharomyces cerevisiae | 0.0 | 0.0 | RNA-Seq | untreated |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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