ERR2603016 (PRJEB26593)

Processing Status: Completed

General Details

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Sample Name SAMEA4698423
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 43279864
Total Bases 1287672558
Total Bases 1287672558

Repository Details

SRA ERR2603016
ENA ERR2603016
BioProject PRJEB26593

Experiment Details

Title Non-infected LoVo cells, Replicate 1

Sample Details

Run Accession ERR2603016
Total Number Of Spots (Original File)) 43279864
Total Number Of Bases (Original File) 1287672558
Average Read Length 29
Original File Size (Mb) 1442
Experiment Id ERX2619672
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 0h (mock infection), replicate 1
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518595
Biosample SAMEA4698423
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698423
Submission ERA1502185
Month 5
Year 2020
Sample Title Non-infected LoVo cells, Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Control
Inhibitor Cycloheximide
Timepoint 0h
Tissue Colon
Cell-Line LoVo
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603016 Homo sapiens LoVo Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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