ERR2603017 (PRJEB26593)

Processing Status: Completed

General Details

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Sample Name SAMEA4698424
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 54067560
Total Bases 1595685866
Total Bases 1595685866

Repository Details

SRA ERR2603017
ENA ERR2603017
BioProject PRJEB26593

Experiment Details

Title Non-infected LoVo cells, Replicate 2

Sample Details

Run Accession ERR2603017
Total Number Of Spots (Original File)) 54067560
Total Number Of Bases (Original File) 1595685866
Average Read Length 29
Original File Size (Mb) 1789
Experiment Id ERX2619673
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 0h (mock infection), replicate 2
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518596
Biosample SAMEA4698424
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698424
Submission ERA1502185
Month 5
Year 2020
Sample Title Non-infected LoVo cells, Replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Control
Inhibitor Cycloheximide
Timepoint 0h
Tissue Colon
Cell-Line LoVo
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603017 Homo sapiens LoVo Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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