ERR2603021 (PRJEB26593)

Processing Status: Not Yet Started

General Details

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Sample Name SAMEA4698428
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 36519762
Total Bases 1072544267
Total Bases 1072544267

Repository Details

SRA ERR2603021
ENA ERR2603021
BioProject PRJEB26593

Experiment Details

Title LoVo cells 2h after infection by Listeria monocytogenes strain LL195 - Replicate 3

Sample Details

Run Accession ERR2603021
Total Number Of Spots (Original File)) 36519762
Total Number Of Bases (Original File) 1072544267
Average Read Length 29
Original File Size (Mb) 1218
Experiment Id ERX2619677
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 2h post-infection), replicate 3
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518600
Biosample SAMEA4698428
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698428
Submission ERA1502185
Month 5
Year 2020
Sample Title LoVo cells 2h after infection by Listeria monocytogenes strain LL195 - Replicate 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Timepoint 2h
Tissue Colon
Cell-Line LoVo
Cellular-Compartment Cytoplasmic
Infected Listeria monocytogenes LL195, 2 h
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603021 Homo sapiens LoVo Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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