ERR2603022 (PRJEB26593)

Processing Status: Not Yet Started

General Details

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Sample Name SAMEA4698429
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 41444539
Total Bases 1232868408
Total Bases 1232868408

Repository Details

SRA ERR2603022
ENA ERR2603022
BioProject PRJEB26593

Experiment Details

Title LoVo cells 5h after infection by Listeria monocytogenes strain LL195 - Replicate 1

Sample Details

Run Accession ERR2603022
Total Number Of Spots (Original File)) 41444539
Total Number Of Bases (Original File) 1232868408
Average Read Length 29
Original File Size (Mb) 1392
Experiment Id ERX2619678
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 5h post-infection), replicate 1
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518601
Biosample SAMEA4698429
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698429
Submission ERA1502185
Month 5
Year 2020
Sample Title LoVo cells 5h after infection by Listeria monocytogenes strain LL195 - Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Timepoint 5h
Tissue Colon
Cell-Line LoVo
Cellular-Compartment Cytoplasmic
Infected Listeria monocytogenes LL195, 5 h
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603022 Homo sapiens LoVo Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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