ERR2603024 (PRJEB26593)

Processing Status: Not Yet Started

General Details

View quality reports

Sample Name SAMEA4698431
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 42766719
Total Bases 1242349575
Total Bases 1242349575

Repository Details

SRA ERR2603024
ENA ERR2603024
BioProject PRJEB26593

Experiment Details

Title LoVo cells 5h after infection by Listeria monocytogenes strain LL195 - Replicate 3

Sample Details

Run Accession ERR2603024
Total Number Of Spots (Original File)) 42766719
Total Number Of Bases (Original File) 1242349575
Average Read Length 29
Original File Size (Mb) 1412
Experiment Id ERX2619680
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 5h post-infection), replicate 3
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518603
Biosample SAMEA4698431
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698431
Submission ERA1502185
Month 5
Year 2020
Sample Title LoVo cells 5h after infection by Listeria monocytogenes strain LL195 - Replicate 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Timepoint 5h
Tissue Colon
Cell-Line LoVo
Cellular-Compartment Cytoplasmic
Infected Listeria monocytogenes LL195, 5 h
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603024 Homo sapiens LoVo Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About