ERR2603025 (PRJEB26593)

General Details

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Sample Name SAMEA4698432
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 37852768
Total Bases 1135147102
Total Bases 1135147102

Repository Details

SRA ERR2603025
ENA ERR2603025
BioProject PRJEB26593

Experiment Details

Title LoVo cells 10h after infection by Listeria monocytogenes strain LL195 - Replicate 1

Sample Details

Run Accession ERR2603025
Total Number Of Spots (Original File)) 37852768
Total Number Of Bases (Original File) 1135147102
Average Read Length 29
Original File Size (Mb) 1274
Experiment Id ERX2619681
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 10h post-infection), replicate 1
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518604
Biosample SAMEA4698432
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698432
Submission ERA1502185
Month 5
Year 2020
Sample Title LoVo cells 10h after infection by Listeria monocytogenes strain LL195 - Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Timepoint 10h
Tissue Colon
Cell-Line LoVo
Cellular-Compartment Cytoplasmic
Infected Listeria monocytogenes LL195, 10 h
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603025 Homo sapiens LoVo Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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