ERR2603025 (PRJEB26593)
Processing Status: Not Yet Started
General Details
| Sample Name | SAMEA4698432 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 5/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 37852768 |
|---|---|
| Total Bases | 1135147102 |
| Total Bases | 1135147102 |
Repository Details
| SRA | ERR2603025 |
|---|---|
| ENA | ERR2603025 |
| BioProject | PRJEB26593 |
Experiment Details
| Title | LoVo cells 10h after infection by Listeria monocytogenes strain LL195 - Replicate 1 |
|---|
Sample Details
| Run Accession | ERR2603025 |
|---|---|
| Total Number Of Spots (Original File)) | 37852768 |
| Total Number Of Bases (Original File) | 1135147102 |
| Average Read Length | 29 |
| Original File Size (Mb) | 1274 |
| Experiment Id | ERX2619681 |
| Library Name | Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 10h post-infection), replicate 1 |
| Library Strategy | RNA-Seq |
| Library Selection | size fractionation |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | ERP108595 |
| Pubmed Id | <NA> |
| Sample | ERS2518604 |
| Biosample | SAMEA4698432 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | SAMEA4698432 |
| Center Name | 0.0 |
| Submission | ERA1502185 |
| Month | 5 |
| Year | 2020 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | LoVo cells 10h after infection by Listeria monocytogenes strain LL195 - Replicate 1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | 0.0 |
| Inhibitor | 0.0 |
| Timepoint | 10h |
| Tissue | Colon |
| Cell-Line | LoVo |
| Cellular-Compartment | Cytoplasmic |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | Listeria monocytogenes LL195, 10 h |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR2603025 | Homo sapiens | 0.0 | LoVo | Ribo-Seq | 0.0 |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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