ERR2603027 (PRJEB26593)

Processing Status: Not Yet Started

General Details

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Sample Name SAMEA4698434
Organism Homo sapiens
Release Date 5/2020

Sample Links

Run Details

Spots 42030480
Total Bases 1217871290
Total Bases 1217871290

Repository Details

SRA ERR2603027
ENA ERR2603027
BioProject PRJEB26593

Experiment Details

Title LoVo cells 10h after infection by Listeria monocytogenes strain LL195 - Replicate 3

Sample Details

Run Accession ERR2603027
Total Number Of Spots (Original File)) 42030480
Total Number Of Bases (Original File) 1217871290
Average Read Length 28
Original File Size (Mb) 1383
Experiment Id ERX2619683
Library Name Ribosome profiling (RiboSeq) of ribosome footprints from LoVo cells at time 10h post-infection), replicate 1
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) ERP108595
Pubmed Id <NA>
Sample ERS2518606
Biosample SAMEA4698434
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name SAMEA4698434
Submission ERA1502185
Month 5
Year 2020
Sample Title LoVo cells 10h after infection by Listeria monocytogenes strain LL195 - Replicate 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Timepoint 10h
Tissue Colon
Cell-Line LoVo
Cellular-Compartment Cytoplasmic
Infected Listeria monocytogenes LL195, 10 h
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR2603027 Homo sapiens LoVo Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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