ERR3225412 (PRJEB31750)
Processing Status: Failed
General Details
| Sample Name | SAMEA5425599 |
|---|---|
| Organism | Mus musculus |
| Release Date | 4/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 36857993 |
|---|---|
| Total Bases | 2137763594 |
| Total Bases | 2137763594 |
Repository Details
| SRA | ERR3225412 |
|---|---|
| ENA | ERR3225412 |
| BioProject | PRJEB31750 |
Experiment Details
| Title | CKO_RPF_3 |
|---|
Sample Details
| Run Accession | ERR3225412 |
|---|---|
| Total Number Of Spots (Original File)) | 36857993 |
| Total Number Of Bases (Original File) | 2137763594 |
| Average Read Length | 58 |
| Original File Size (Mb) | 640 |
| Experiment Id | ERX3252864 |
| Library Name | CKO_RPF_3_s |
| Library Strategy | OTHER |
| Library Selection | MNase |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | ERP114344 |
| Pubmed Id | <NA> |
| Sample | ERS3230887 |
| Biosample | SAMEA5425599 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | SAMEA5425599 |
| Center Name | MRC Centre for Regenerative Medicine, Institute for Stem Cell Research, School of Biological Sciences, University of Edinburgh |
| Submission | ERA1772855 |
| Month | 4 |
| Year | 2019 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | CKO_RPF_3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 0.0 |
| Condition | Test |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | Stem |
| Cell-Line | pre-leukemic stem cellNA_hematopoietic cell |
| Cellular-Compartment | ribosome protected fragments_ribosome protected fragments |
| Stage | embryonic day 14.5 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | Ythdf2 fl/fl; Vav-iCre_Ythdf2 fl/fl; Vav-iCre |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | acute myeloid leukemia |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR3225412 | Mus musculus | 0.0 | pre-leukemic stem cellNA_hematopoietic cell | Ribo-Seq | 0.0 |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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