ERR3366366 (PRJEB32965)
Processing Status: Not Yet Started
General Details
| Sample Name | SAMEA5703336 |
|---|---|
| Organism | Mycobacterium tuberculosis |
| Release Date | 6/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 174806789 |
|---|---|
| Total Bases | 8915146239 |
| Total Bases | 8915146239 |
Repository Details
| SRA | ERR3366366 |
|---|---|
| ENA | ERR3366366 |
| BioProject | PRJEB32965 |
Experiment Details
| Title | mc2-7000 rep 1 |
|---|
Sample Details
| Run Accession | ERR3366366 |
|---|---|
| Total Number Of Spots (Original File)) | 174806789 |
| Total Number Of Bases (Original File) | 8915146239 |
| Average Read Length | 51 |
| Original File Size (Mb) | 6055 |
| Experiment Id | ERX3390646 |
| Library Name | mc2-7000 rep 1_s |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | ERP115711 |
| Pubmed Id | <NA> |
| Sample | ERS3506993 |
| Biosample | SAMEA5703336 |
| Sample Type | simple |
| Organism Taxid | 83332 |
| Organism | Mycobacterium tuberculosis |
| Sample Name | SAMEA5703336 |
| Center Name | Wadsworth Center |
| Submission | ERA1994199 |
| Month | 6 |
| Year | 2019 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | mc2-7000 rep 1 |
| Library-Type | 0.0 |
| Replicate-Number | 1.0 |
| Condition | 0.0 |
| Inhibitor | untreated |
| Timepoint | NANA |
| Tissue | Whole Organism |
| Cell-Line | mc2-7000NA |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | mc2-7000 |
| Age | OD600=1.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | wild type genotype |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR3366366 | Mycobacterium tuberculosis | 0.0 | mc2-7000NA | 0.0 | untreated |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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