ERR3366407 (PRJEB32969)
Processing Status: Not Yet Started
General Details
| Sample Name | SAMEA5703371 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 7/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 12881017 |
|---|---|
| Total Bases | 487714175 |
| Total Bases | 487714175 |
Repository Details
| SRA | ERR3366407 |
|---|---|
| ENA | ERR3366407 |
| BioProject | PRJEB32969 |
Experiment Details
| Title | Sample 4 |
|---|
Sample Details
| Run Accession | ERR3366407 |
|---|---|
| Total Number Of Spots (Original File)) | 12881017 |
| Total Number Of Bases (Original File) | 487714175 |
| Average Read Length | 37 |
| Original File Size (Mb) | 216 |
| Experiment Id | ERX3390681 |
| Library Name | Sample 4_s |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | ERP115717 |
| Pubmed Id | <NA> |
| Sample | ERS3507028 |
| Biosample | SAMEA5703371 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | SAMEA5703371 |
| Center Name | UNIVERSITY OF CAMBRIDGE |
| Submission | ERA1994565 |
| Month | 7 |
| Year | 2020 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | Sample 4 |
| Library-Type | 0.0 |
| Replicate-Number | 4.0 |
| Condition | 0.0 |
| Inhibitor | Lactimidomycin |
| Timepoint | NANA |
| Tissue | Colon |
| Cell-Line | Caco-2NA_epithelial cell |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | Human astrovirus 1 |
| Disease | 0.0 |
| Genotype | wild type genotype |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | colorectal adenocarcinoma |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 50 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR3366407 | Homo sapiens | 0.0 | Caco-2NA_epithelial cell | 0.0 | Lactimidomycin |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About