ERR4579388 (PRJEB40288)
Processing Status: Not Yet Started
General Details
| Sample Name | SAMEA7297004 |
|---|---|
| Organism | Rattus norvegicus |
| Release Date | 10/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 21936260 |
|---|---|
| Total Bases | 3311974291 |
| Total Bases | 3311974291 |
Repository Details
| SRA | ERR4579388 |
|---|---|
| ENA | ERR4579388 |
| BioProject | PRJEB40288 |
Experiment Details
| Title | Transcriptome_in vivo_SH_1 |
|---|
Sample Details
| Run Accession | ERR4579388 |
|---|---|
| Total Number Of Spots (Original File)) | 21936260 |
| Total Number Of Bases (Original File) | 3311974291 |
| Average Read Length | 75 |
| Original File Size (Mb) | 1318 |
| Experiment Id | ERX4515045 |
| Library Name | Transcriptome_in vivo_SH_1_p |
| Library Strategy | RNA-Seq |
| Library Selection | Oligo-dT |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | PAIRED |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | HiSeq X Ten |
| Sra Project Accession (Srp) | ERP123908 |
| Pubmed Id | <NA> |
| Sample | ERS5055569 |
| Biosample | SAMEA7297004 |
| Sample Type | simple |
| Organism Taxid | 10116 |
| Organism | Rattus norvegicus |
| Sample Name | SAMEA7297004 |
| Center Name | Department of Cardiology, the Third Xiangya Hospital of Central South University |
| Submission | ERA2870665 |
| Month | 10 |
| Year | 2020 |
| Sample Title | Transcriptome_in vivo_SH_1 |
| Timepoint | 0.50_NA |
| Tissue | Heart |
| Cell-Line | not applicable_cardiomyocyte |
| Stage | adult |
| Sex | male |
| Strain | Sprague-Dawley |
| Age | 6 to 8 |
| Genotype | wild type genotype |
| Temperature | severe hypoxia |
| Growth-Condition | in vivo_in vivo |
| Stress | severe hypoxia |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR4579388 | Rattus norvegicus | not applicable_cardiomyocyte |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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