ERR6109842 (PRJEB45876)
Processing Status: Completed
General Details
| Sample Name | SAMEA9252530 |
|---|---|
| Organism | Chlorocebus sabaeus |
| Release Date | 3/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 41325968 |
|---|---|
| Total Bases | 3140773568 |
| Total Bases | 3140773568 |
Repository Details
| SRA | ERR6109842 |
|---|---|
| ENA | ERR6109842 |
| BioProject | PRJEB45876 |
Experiment Details
| Title | noCHX_Ribo_12hpi_KO2_2 |
|---|
Sample Details
| Run Accession | ERR6109842 |
|---|---|
| Total Number Of Spots (Original File)) | 41325968 |
| Total Number Of Bases (Original File) | 3140773568 |
| Average Read Length | 76 |
| Original File Size (Mb) | 1121 |
| Experiment Id | ERX5747063 |
| Library Name | noCHX_Ribo_12hpi_KO2_2_s |
| Library Strategy | OTHER |
| Library Selection | size fractionation |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | ERP130048 |
| Pubmed Id | <NA> |
| Sample | ERS6987133 |
| Biosample | SAMEA9252530 |
| Sample Type | simple |
| Organism Taxid | 60711 |
| Organism | Chlorocebus sabaeus |
| Sample Name | SAMEA9252530 |
| Center Name | Division of Virology, Department of Pathology, University of Cambridge |
| Submission | ERA4939871 |
| Month | 3 |
| Year | 2022 |
| Sample Title | noCHX_Ribo_12hpi_KO2_2 |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | 12h |
| Tissue | Kidney |
| Cell-Line | MARC-145 |
| Stage | late embryo |
| Infected | PRRSV-2 KO2PRRSV-2 KO2 |
| Cancer | normal |
| Dose | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR6109842 | Chlorocebus sabaeus | MARC-145 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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