ERR6133656 (PRJEB45612)

Processing Status: Completed

General Details

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Sample Name SAMEA8911877
Organism Kluyveromyces marxianus
Release Date 10/2021

Sample Links

Run Details

Spots 16450824
Total Bases 472973666
Total Bases 472973666

Repository Details

SRA ERR6133656
ENA ERR6133656
BioProject PRJEB45612

Experiment Details

Title Ribosome Profiling 40oC 60 minutes Biological Replicate 1

Sample Details

Run Accession ERR6133656
Total Number Of Spots (Original File)) 16450824
Total Number Of Bases (Original File) 472973666
Average Read Length 28
Original File Size (Mb) 182
Experiment Id ERX5770498
Library Name 40oC_60min_replicate_1_riboseq
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) ERP129748
Pubmed Id <NA>
Sample ERS6594761
Biosample SAMEA8911877
Sample Type simple
Organism Taxid 4911
Organism Kluyveromyces marxianus
Sample Name SAMEA8911877
Center Name UNIVERSITY COLLEGE CORK
Submission ERA5029256
Month 10
Year 2021
Author 0.0
Sample Source 0.0
Sample Title Ribosome Profiling 40oC 60 minutes Biological Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain CBS6556
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
ERR6133656 Kluyveromyces marxianus 0.0 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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