ERR9951986 (PRJEB54714)
Processing Status: Completed
General Details
| Sample Name | SAMEA110356746 |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 7/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 101464583 |
|---|---|
| Total Bases | 8705855818 |
| Total Bases | 8705855818 |
Repository Details
| SRA | ERR9951986 |
|---|---|
| ENA | ERR9951986 |
| BioProject | PRJEB54714 |
Experiment Details
| Title | Riboseq-Col-0 biol rep 1 |
|---|
Sample Details
| Run Accession | ERR9951986 |
|---|---|
| Total Number Of Spots (Original File)) | 101464583 |
| Total Number Of Bases (Original File) | 8705855818 |
| Average Read Length | 85 |
| Original File Size (Mb) | 3308 |
| Experiment Id | ERX9495406 |
| Library Name | Riboseq-Col-0 biol rep 1_s |
| Library Strategy | OTHER |
| Library Selection | RT-PCR |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | ERP139564 |
| Pubmed Id | <NA> |
| Sample | ERS12454458 |
| Biosample | SAMEA110356746 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | SAMEA110356746 |
| Center Name | Botanical Institute of the Christian-Albrechts-University of Kiel Genetics and molecularbiology in plants |
| Submission | ERA16467128 |
| Month | 7 |
| Year | 2022 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | Riboseq-Col-0 biol rep 1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Test |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | Flower |
| Cell-Line | 0.0 |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | wild type genotype_wild type genotype |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ERR9951986 | Arabidopsis thaliana | 0.0 | 0.0 | Ribo-Seq | 0.0 |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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