SRR057516 (PRJNA129385)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM546922
Organism Homo sapiens
Release Date 8/2010

Sample Links

Run Details

Spots 5901290
Total Bases 212446440
Total Bases 212446440

Repository Details

SRA SRR057516
ENA SRR057516
BioProject PRJNA129385

Experiment Details

Title Footprint_miR-155_32hr_runs1-2

Sample Details

Run Accession SRR057516
Total Number Of Spots (Original File)) 5901290
Total Number Of Bases (Original File) 212446440
Average Read Length 36
Original File Size (Mb) 149
Experiment Id SRX021968
Library Name GSM546922: Footprint_miR-155_32hr_runs1-2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP002605
Pubmed Id 20703300
Sample SRS079387
Biosample SAMN00014832
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM546922
Center Name GEO
Submission SRA020150
Month 8
Year 2010
Author Guo
Sample Source HeLa
Sample Title Footprint_miR-155_32hr_runs1-2
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Timepoint 32hrNA
Sex female
Plasmid miR-1 duplex
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR057516 Homo sapiens HeLa Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About