SRR057521 (PRJNA129385)

Processing Status: Completed

General Details

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Sample Name GSM546924
Organism Homo sapiens
Release Date 8/2010

Sample Links

Run Details

Spots 5910808
Total Bases 212789088
Total Bases 212789088

Repository Details

SRA SRR057521
ENA SRR057521
BioProject PRJNA129385

Experiment Details

Title Footprint_miR-1_32hr_runs1-2

Sample Details

Run Accession SRR057521
Total Number Of Spots (Original File)) 5910808
Total Number Of Bases (Original File) 212789088
Average Read Length 36
Original File Size (Mb) 148
Experiment Id SRX021970
Library Name GSM546924: Footprint_miR-1_32hr_runs1-2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP002605
Pubmed Id 20703300
Sample SRS079389
Biosample SAMN00014834
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM546924
Center Name GEO
Submission SRA020150
Month 8
Year 2010
Author Guo
Sample Source HeLa
Sample Title Footprint_miR-1_32hr_runs1-2
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Timepoint 12hrNA
Sex female
Plasmid miR-1 duplex
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR057521 Homo sapiens HeLa Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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