SRR057522 (PRJNA129385)

Processing Status: Completed

General Details

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Sample Name GSM546924
Organism Homo sapiens
Release Date 8/2010

Sample Links

Run Details

Spots 14178182
Total Bases 510414552
Total Bases 510414552

Repository Details

SRA SRR057522
ENA SRR057522
BioProject PRJNA129385

Experiment Details

Title Footprint_miR-1_32hr_runs1-2

Sample Details

Run Accession SRR057522
Total Number Of Spots (Original File)) 14178182
Total Number Of Bases (Original File) 510414552
Average Read Length 36
Original File Size (Mb) 347
Experiment Id SRX021970
Library Name GSM546924: Footprint_miR-1_32hr_runs1-2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP002605
Pubmed Id 20703300
Sample SRS079389
Biosample SAMN00014834
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM546924
Center Name GEO
Submission SRA020150
Month 8
Year 2010
Author Guo
Sample Source HeLa
Sample Title Footprint_miR-1_32hr_runs1-2
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Timepoint 12hrNA
Sex female
Plasmid miR-1 duplex
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR057522 Homo sapiens HeLa Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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